Writing Guides
- Writing a Control Paper
 - How to Write a Paper
 - Writing Tips for PhD Students
 - Tips for Writing Technical Papers
 - How to Write a Good Technical Report
 - How to Write Good Technical Papers
 - How to Write a Successful Technical Paper
 - How to Write a Technical Paper
 - Mayfield Handbook of Technical and Scientific Writing
 - Communication Skills
 - How to publish your research
 
Reproducible Research
- Replication
 - 3D Data
 - Reproducible Research Examples in Org Mode
 - Reproducible Research
 - Emacs Org Mode
 - Reproducible Research with R/RStudio
 
Coding Standards
Tools
- The doc tools
 - Word Processing
 - Wiki
 - Mind Maps
* [Mind Mapping](http://www.mind-mapping.org/) 
Pandoc
Reference Management
Markdown
Papers
- Plain Text Papers Pandoc
 - Rendering Markdown, Asciidoc and Friends automatically while Editing
 - Academic Markdown
 - Bookdown
 
Documentations
Editors
- CuteMarkEd
 - Hallo
 - Strapdownjs - Mathjax support with conflict
 - Texts
 - StackEdit
 - Haroo Pad
 - Dillinger
 - Draftin
 - NoTeX
 - jaxedit
 - Markable
 - MarkdownPad
 - atavist, markdown site generator
 - RStudio
 - Markdown for Mac
 
Blog
Web
Themes
Templates
Tools
- Try Pandoc
 - Python-Markdown
 - 78 Tools for writing and previewing Markdown
 - Pandoc seed project
 - mdpress
 - Rippledoc
 - wkhtmltopdf